Links

Bioinformatics

NCBI

Pubmed
Nucl
Prot
Genomes
Viruses
SRA GEO EBI
Gene
Taxonomy
ORF Finder
Youtube
FTP

Search Algorithms

BLAST FTP
Dev. info

Pfam
CDD
FASTA

MOTIF ScanProsite MATCH TESS

Alignments

ClustalW2
MultAlin

Jalview
Needle/Water

Phylodendron

Software and Tools

SMS2 SMS Seq. Massager
B2 T2 C2 SAMtools
0.1.x 1.x

ExPASy
EMBOSS

BRB-ArrayTools TM4 SNOMAD

Queens Univ. Softberry
mFOLD
Primer3
IDT
OligoCalc

NEB
Cutter

Peptide
calc.

Networks/Pathways

DAVID
GSEA
PantherDB
Ingenuity(IPA)
BioGRID
BioNetworks
BIND
BioCarta
GeneCards
KEGG
MINT
Reactome
String
VirusMINT
VirHostNet

Visualization

PCA
Circos

Genome Sites

Ensembl
UCSC
MGI

Sequences

pRSVBneoT
(txt)

Virus stuff

SV40: gb
TAg

BKV
JCV
SA12
LPV
Mouse PyV

PhagesDB links
ICTV
Viral Zone

Laboratory Sites

Pitt-GPCL JD TS
PB
ME
SG